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Chipster

Chipster

Description

Chipster is a user-friendly analysis software for high-throughput data. It contains over 350 analysis tools for next generation sequencing (NGS), microarray, proteomics and sequence data. Users can save and share automatic analysis workflows, and visualize data interactively using a built-in genome browser and many other visualizations.


Available

Launch Site

http://chipster.csc.fi/


Usage

Chipster's client software uses Java Web Start to install itself automatically on user's computer, and it connects to CSC's computing servers for the actual analysis. You can launch the client software at http://chipster.csc.fi/ using your CSC account.


Discipline

Biosciences

References

M Aleksi Kallio, Jarno T Tuimala, Taavi Hupponen, Petri Klemelä, Massimiliano Gentile, Ilari Scheinin, Mikko Koski, Janne Käki, Eija I Korpelainen: Chipster: user-friendly analysis software for microarray and other high-throughput data (2011) BMC Genomics 12: 507


Support

chipster@csc.fi


Manual

In order to get started, please see the manual and the tutorial videos.