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FastQC

FastQC

Description

A quality control tool for high throughput sequence data.


Available

Version on CSC's Servers

Taito: 0.11.6
Chipster graphical user interface


Usage

To initialize In Taito use:

module load biokit

You can then start FastQC:

fastqc

FastQC is a graphical software so you will need a working X-term connection. Alternatively you could you FreeNX remote desktop. See CSC computing environment user guide for details.

See Taito User Guide for infomation on running interactive jobs in Taito.


Discipline

Biosciences

References


Support

servicedesk@csc.fi


Manual