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MIRA

MIRA

Description

MIRA is a whole genome shotgun and EST sequence assembler.  The current  version is able to perform true hybrid de novo assemblies using reads gathered through NGS sequencing technology.


Available

Version on CSC's Servers

Taito: 4.9.5_2, 5rc2


Usage

To see available versions, use command:

module spider mira

To load versions up to 4 use command:

module load mira/version

e.g.

module load mira/4.9.5

To load version 5 use commands:

module purge
module load gcc/6.2.0
module load mira/version

e.g.

module load mira/5rc2

To run MIRA use:

mira <options>

e.g.

mira --help

 


Discipline

Biosciences

References

See the list of references in MIRA webpages: http://www.chevreux.org/mira_papersnposters.html


Support

helpdesk@csc.fi


Manual

More information about MIRA can be found form the MIRA home page.