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PANNZER2

PANNZER2

Description

PANNZER2/SANSPANZ 3 protein annotation tool.


Available

Version on CSC's Servers

Taito


Usage

In Taito, SANSPANZ 3 annotation tool is taken in use with command:

module load sanspanz

 You should note that this tool unloads all the other modules (e.g. biokit).

After loading the module you can launch sanspanz analysis using command

runsanspanz.py -R -m Pannzer -s "species name" -i input_seqs.fasta

For more information run command:

runsanspanz.py -h

Or check the SANSPANZ homepage:

  http://ekhidna2.biocenter.helsinki.fi/sanspanz

 


Discipline

Biosciences

References

http://ekhidna2.biocenter.helsinki.fi/sanspanz


Support

servicedesk@csc.fi


Manual